Node 49
Ancestral DNA sequence:
Probabilities of bases and MPB (most probable base) at each site.
Site	A	C	G	T	MPB	Probability
1	1	0	0	0	A	1
2	0	0	0	1	T	1
3	0	0	1	0	G	1
4	1	0	0	0	A	1
5	0	0	0	1	T	1
6	0	0.01	0	0.99	T	0.99
7	1	0	0	0	A	1
8	0	0	0	1	T	1
9	0	0.03	0	0.96	T	0.96
10	0.01	0.04	0.01	0.93	T	0.93
11	0	0	0	1	T	1
12	0.5	0.21	0.02	0.27	A	0.5
13	0.98	0	0.02	0	A	0.98
14	1	0	0	0	A	1
15	0.01	0.03	0	0.95	T	0.95
16	1	0	0	0	A	1
17	0	1	0	0	C	1
18	0	0.99	0	0.01	C	0.99
19	0	0	0	1	T	1
20	0	0	0	1	T	1
21	1	0	0	0	A	1
22	0	0	1	0	G	1
23	0.99	0	0.01	0	A	0.99
24	0.11	0.47	0.06	0.36	C	0.47
25	0	0	1	0	G	1
26	1	0	0	0	A	1
27	0.43	0	0.57	0	G	0.57
28	0	0	0	1	T	1
29	0	0	0	1	T	1
30	0	0.09	0	0.91	T	0.91
31	0.01	0.99	0	0	C	0.99
32	1	0	0	0	A	1
33	0.01	0	0.99	0	G	0.99
34	0.28	0.59	0.05	0.08	C	0.59
35	0.08	0.01	0.9	0.01	G	0.9
36	0	0.62	0	0.38	C	0.62
37	0.38	0	0.61	0	G	0.61
38	0	0	0	1	T	1
39	0	0.04	0	0.96	T	0.96
40	0	0	0	1	T	1
41	1	0	0	0	A	1
42	0	0.06	0	0.94	T	0.94
43	0	1	0	0	C	1
44	0	0	1	0	G	1
45	0.31	0.05	0.58	0.06	G	0.58
46	0.02	0	0.98	0	G	0.98
47	0.42	0.36	0.04	0.18	A	0.42
48	0.18	0.05	0.71	0.07	G	0.71
49	0	0	1	0	G	1
50	0	0	1	0	G	1
51	0.14	0.16	0.64	0.06	G	0.64
52	1	0	0	0	A	1
53	1	0	0	0	A	1
54	0.94	0	0.06	0	A	0.94
55	1	0	0	0	A	1
56	1	0	0	0	A	1
57	1	0	0	0	A	1
58	0	0	0	1	T	1
59	0	0	1	0	G	1
60	0	0	1	0	G	1
61	0	1	0	0	C	1
62	1	0	0	0	A	1
63	0.08	0	0.91	0	G	0.91
64	0	1	0	0	C	1
65	0	0	1	0	G	1
66	0	0.95	0	0.05	C	0.95
67	0	0	0	1	T	1
68	0	0	1	0	G	1
69	0	0.01	0	0.99	T	0.99
70	0.99	0	0.01	0	A	0.99
71	0	0	0	1	T	1
72	0.12	0.07	0.78	0.03	G	0.78
73	0	0	1	0	G	1
74	1	0	0	0	A	1
75	0.01	0	0.99	0	G	0.99
76	0	0	1	0	G	1
77	0	1	0	0	C	1
78	0.04	0.21	0.02	0.73	T	0.73
79	1	0	0	0	A	1
80	0	0	0	1	T	1
81	0	0.9	0	0.1	C	0.9
82	0.99	0	0.01	0	A	0.99
83	1	0	0	0	A	1
84	0	0.15	0	0.84	T	0.84
85	1	0	0	0	A	1
86	1	0	0	0	A	1
87	0	0.98	0	0.02	C	0.98
88	0.01	0.98	0	0.01	C	0.98
89	0	0	0	1	T	1
90	0	0.07	0.01	0.92	T	0.92
91	0.96	0	0.04	0	A	0.96
92	1	0	0	0	A	1
93	0.47	0.08	0.25	0.2	A	0.47
94	1	0	0	0	A	1
95	0.89	0	0.11	0	A	0.89
96	0	0.25	0	0.75	T	0.75
97	1	0	0	0	A	1
98	0	0	0	1	T	1
99	0	0.05	0	0.95	T	0.95
100	0.75	0	0.25	0	A	0.75
101	0.98	0.01	0.01	0	A	0.98
102	0.05	0.02	0.89	0.04	G	0.89
103	0	1	0	0	C	1
104	0	1	0	0	C	1
105	0.26	0.14	0.15	0.45	T	0.45
106	0.99	0	0.01	0	A	0.99
107	1	0	0	0	A	1
108	0	0.01	0	0.99	T	0.99
109	0.01	0	0.99	0	G	0.99
110	0	0	0	1	T	1
111	0.01	0.07	0.01	0.91	T	0.91
112	0	0	0	1	T	1
113	0	0	0	1	T	1
114	0	0.02	0	0.98	T	0.98
115	0	0	0	1	T	1
116	1	0	0	0	A	1
117	0	0	0	1	T	1
118	0	0	0	1	T	1
119	0	1	0	0	C	1
120	0.07	0.01	0.92	0.01	G	0.92
121	1	0	0	0	A	1
122	0	0	0	1	T	1
123	0.29	0.13	0.07	0.5	T	0.5
124	0	0	1	0	G	1
125	0	0	1	0	G	1
126	0.02	0.56	0.03	0.39	C	0.56
127	0	0	1	0	G	1
128	1	0	0	0	A	1
129	0	0.03	0	0.97	T	0.97
130	0	0	0	1	T	1
131	0	1	0	0	C	1
132	0.27	0.01	0.72	0.01	G	0.72
133	0	1	0	0	C	1
134	0	0	0	1	T	1
135	0.01	0	0.99	0	G	0.99
136	0	0	1	0	G	1
137	0	0	0	1	T	1
138	0.08	0.13	0.04	0.76	T	0.76
139	0	0	0	1	T	1
140	1	0	0	0	A	1
141	0	0.01	0	0.99	T	0.99
142	0	1	0	0	C	1
143	0	0	1	0	G	1
144	0	0.96	0	0.04	C	0.96
145	0	0.99	0	0.01	C	0.99
146	0	0	0	1	T	1
147	0.02	0.23	0.03	0.72	T	0.72
148	0.02	0	0.98	0	G	0.98
149	0	0.99	0	0	C	0.99
150	0.1	0.34	0.28	0.27	C	0.34
151	0.01	0	0.99	0	G	0.99
152	0.97	0.01	0.01	0	A	0.97
153	0.36	0.15	0.09	0.4	T	0.4
154	0	0	1	0	G	1
155	0	0	1	0	G	1
156	0	0.13	0	0.86	T	0.86
157	0.23	0.17	0.09	0.51	T	0.51
158	0.02	0.93	0.01	0.04	C	0.93
159	0.02	0.11	0.01	0.85	T	0.85
160	0	0	1	0	G	1
161	0.04	0.38	0.38	0.2	G	0.38
162	0.63	0.12	0.12	0.12	A	0.63
163	0.1	0.43	0.38	0.09	C	0.43
164	0.97	0	0.02	0	A	0.97
165	0.1	0.26	0.5	0.14	G	0.5
166	0.16	0.7	0.09	0.05	C	0.7
167	0.72	0.18	0.09	0.01	A	0.72
168	0.12	0.26	0.46	0.16	G	0.46
169	0	0	0.99	0	G	0.99
170	0.74	0.01	0.22	0.03	A	0.74
171	0.29	0.21	0.33	0.17	G	0.33
172	0	0	1	0	G	1
173	0.74	0	0.26	0	A	0.74
174	0.4	0.03	0.55	0.02	G	0.55
175	0	0.05	0	0.95	T	0.95
176	0	0	0	0.99	T	0.99
177	0.92	0	0.08	0	A	0.92
178	0	0	0	1	T	1
179	0	0	0	1	T	1
180	0	0.04	0.01	0.94	T	0.94
181	0	0	1	0	G	1
182	1	0	0	0	A	1
183	0.9	0	0.09	0	A	0.9
184	0	0	1	0	G	1
185	0	0	1	0	G	1
186	0.16	0.59	0.1	0.14	C	0.59
187	1	0	0	0	A	1
188	1	0	0	0	A	1
189	0	0.67	0	0.32	C	0.67
190	0	1	0	0	C	1
191	0	0	1	0	G	1
192	0.01	0.87	0.03	0.09	C	0.87
193	0	1	0	0	C	1
194	0	0	1	0	G	1
195	0	0.27	0	0.73	T	0.73
196	0	0	0	1	T	1
197	1	0	0	0	A	1
198	0	0.09	0	0.91	T	0.91
199	0	0	0	1	T	1
200	0	0	0	1	T	1
201	0	0.53	0	0.47	C	0.53
202	0	0	1	0	G	1
203	1	0	0	0	A	1
204	0	0.06	0	0.94	T	0.94
205	0	0	1	0	G	1
206	0	0	0	1	T	1
207	0	0	1	0	G	1
208	0	1	0	0	C	1
209	1	0	0	0	A	1
210	0	0.02	0	0.98	T	0.98
211	0	0	0	1	T	1
212	1	0	0	0	A	1
213	0	0	0	1	T	1
214	0	0	0	1	T	1
215	1	0	0	0	A	1
216	0	0.71	0	0.29	C	0.71
217	0	0.99	0	0.01	C	0.99
218	0	0	0	1	T	1
219	0.1	0.13	0.05	0.71	T	0.71
220	0	0	1	0	G	1
221	0.03	0.92	0.04	0.01	C	0.92
222	0	0.99	0	0.01	C	0.99
223	0	0	1	0	G	1
224	0	0	1	0	G	1
225	0.62	0.01	0.36	0.01	A	0.62
226	0	0.97	0	0.03	C	0.97
227	1	0	0	0	A	1
228	0.27	0.08	0.63	0.03	G	0.63
229	0	0	1	0	G	1
230	1	0	0	0	A	1
231	0.87	0	0.13	0	A	0.87
232	1	0	0	0	A	1
233	0	0.98	0	0.02	C	0.98
234	0.13	0.15	0.67	0.05	G	0.67
235	0.26	0	0.74	0	G	0.74
236	0	0	0	1	T	1
237	0.02	0.19	0.03	0.76	T	0.76
238	0	0	1	0	G	1
239	1	0	0	0	A	1
240	0.09	0	0.91	0	G	0.91
241	0.16	0.01	0.75	0.08	G	0.75
242	0	0	0	1	T	1
243	0	0.07	0	0.93	T	0.93
244	0	0	1	0	G	1
245	0	1	0	0	C	1
246	0.11	0.16	0.6	0.13	G	0.6
247	0.14	0	0.85	0	G	0.85
248	0.94	0.01	0.03	0.01	A	0.94
249	0	0.19	0	0.8	T	0.8
250	1	0	0	0	A	1
251	1	0	0	0	A	1
252	1	0	0	0	A	1
253	0.82	0.01	0.17	0.01	A	0.82
254	0.3	0.05	0.63	0.02	G	0.63
255	0.01	0.82	0.01	0.17	C	0.82
256	0.15	0	0.84	0	G	0.84
257	0.04	0.8	0.02	0.14	C	0.8
258	0.27	0.11	0.57	0.05	G	0.57
259	0	0.04	0	0.96	T	0.96
260	0	0	0	1	T	1
261	0.43	0	0.56	0	G	0.56
262	1	0	0	0	A	1
263	0.01	0.71	0.01	0.27	C	0.71
264	0.08	0.25	0.21	0.47	T	0.47
265	0	0.89	0	0.1	C	0.89
266	0	0.99	0	0.01	C	0.99
267	0.6	0.04	0.27	0.09	A	0.6
268	0	0	1	0	G	1
269	0.99	0	0	0.01	A	0.99
270	0.44	0	0.55	0	G	0.55
271	0.67	0	0.33	0	A	0.67
272	0	0.01	0	0.99	T	0.99
273	0.12	0.09	0.49	0.31	G	0.49
274	0.01	0	0.99	0	G	0.99
275	0	1	0	0	C	1
276	0	0.44	0	0.56	T	0.56
277	0	0	0	1	T	1
278	1	0	0	0	A	1
279	0	0.01	0	0.99	T	0.99
280	0	1	0	0	C	1
281	0.09	0	0.91	0	G	0.91
282	0.04	0.76	0.11	0.08	C	0.76
283	0	0	1	0	G	1
284	1	0	0	0	A	1
285	0	0	0	1	T	1
286	0	0	1	0	G	1
287	1	0	0	0	A	1
288	0.98	0	0.02	0	A	0.98
289	1	0	0	0	A	1
290	0	0	1	0	G	1
291	0	0.11	0	0.88	T	0.88
292	0	0	1	0	G	1
293	1	0	0	0	A	1
294	0	0.81	0	0.19	C	0.81
295	0	1	0	0	C	1
296	0	0	1	0	G	1
297	0.17	0.4	0.23	0.2	C	0.4
298	0	0	1	0	G	1
299	1	0	0	0	A	1
300	0	0	1	0	G	1
301	0	0	0	1	T	1
302	0	0	0	0.99	T	0.99
303	0	0.04	0	0.96	T	0.96
304	0	0	0	1	T	1
305	0	0	0	1	T	1
306	0	0.84	0	0.15	C	0.84
307	0.97	0.01	0.02	0	A	0.97
308	0	0	1	0	G	1
309	0.01	0.59	0.01	0.4	C	0.59
310	0	0	1	0	G	1
311	0	0	1	0	G	1
312	0.12	0.18	0.62	0.08	G	0.62
313	0.01	0.92	0.01	0.07	C	0.92
314	0.95	0	0.05	0	A	0.95
315	0.3	0.01	0.69	0.01	G	0.69
316	0	0	0	0	-	0
317	0	0	0	0	-	0
318	0	0	0	0	-	0
319	0	0	1	0	G	1
320	0	0	1	0	G	1
321	0	0.88	0	0.12	C	0.88
322	0	0	1	0	G	1
323	0.94	0.02	0	0.03	A	0.94
324	0.2	0	0.8	0	G	0.8
325	0.84	0.02	0.14	0	A	0.84
326	0.09	0.73	0.14	0.04	C	0.73
327	0.36	0.07	0.44	0.14	G	0.44
328	0	0.98	0	0.02	C	0.98
329	0.99	0	0.01	0	A	0.99
330	0.02	0.1	0.03	0.85	T	0.85
331	0.13	0.35	0.22	0.31	C	0.35
332	0.92	0.02	0.06	0	A	0.92
333	0.35	0.27	0.3	0.08	A	0.35
334	0	0.96	0.01	0.02	C	0.96
335	0	0	0	1	T	1
336	0.08	0.7	0.09	0.13	C	0.7
337	0.73	0	0.26	0	A	0.73
338	0.86	0.01	0.12	0.01	A	0.86
339	0.28	0.01	0.7	0.01	G	0.7
340	0.01	0	0.99	0	G	0.99
341	0.01	0.99	0	0	C	0.99
342	0.24	0.01	0.71	0.04	G	0.71
343	0	0	1	0	G	1
344	0	0	1	0	G	1
345	0	0.84	0	0.15	C	0.84
346	1	0	0	0	A	1
347	1	0	0	0	A	1
348	0	0.93	0	0.06	C	0.93
349	0	0	1	0	G	1
350	0	0	0	1	T	1
351	0.01	0.79	0.01	0.19	C	0.79
352	0.01	0	0.99	0	G	0.99
353	0	0.01	0	0.99	T	0.99
354	0.02	0.55	0.02	0.41	C	0.55
355	1	0	0	0	A	1
356	0	0	0	1	T	1
357	0	0.39	0	0.61	T	0.61
358	0	0	0	1	T	1
359	0	0	0	1	T	1
360	0	0.17	0	0.83	T	0.83
361	0	0	1	0	G	1
362	1	0	0	0	A	1
363	0.87	0.01	0.09	0.02	A	0.87
364	1	0	0	0	A	1
365	1	0	0	0	A	1
366	0	1	0	0	C	1
367	0	0.94	0	0.05	C	0.94
368	1	0	0	0	A	1
369	0	0.71	0	0.29	C	0.71
370	0	0.99	0.01	0	C	0.99
371	1	0	0	0	A	1
372	0.03	0	0.97	0	G	0.97
373	0	0	1	0	G	1
374	0	1	0	0	C	1
375	0.71	0.03	0.21	0.04	A	0.71
376	0	0.97	0	0.03	C	0.97
377	0.99	0	0.01	0	A	0.99
378	0	1	0	0	C	1
379	0	1	0	0	C	1
380	0	0	1	0	G	1
381	0.34	0.18	0.4	0.08	G	0.4
382	0	0	0	1	T	1
383	0	0	0	1	T	1
384	0	0.14	0	0.86	T	0.86
385	0.26	0.04	0.28	0.42	T	0.42
386	0.07	0.74	0.11	0.08	C	0.74
387	0.1	0.02	0.85	0.03	G	0.85
388	0.01	0.64	0.32	0.02	C	0.64
389	1	0	0	0	A	1
390	0.5	0.04	0.38	0.07	A	0.5
391	0.02	0	0.98	0	G	0.98
392	0.01	0.01	0.98	0	G	0.98
393	0.09	0.14	0.32	0.46	T	0.46
394	0.63	0.05	0.3	0.02	A	0.63
395	1	0	0	0	A	1
396	0.8	0.12	0.02	0.07	A	0.8
397	0.1	0.01	0.89	0	G	0.89
398	0.58	0	0.42	0	A	0.58
399	0.03	0.83	0.04	0.1	C	0.83
400	0	0	1	0	G	1
401	0	0	0	1	T	1
402	0.28	0.09	0.59	0.04	G	0.59
403	0	0	0	0	-	0
404	0	0	0	0	-	0
405	0	0	0	0	-	0
406	0	0	0	0	-	0
407	0	0	0	0	-	0
408	0	0	0	0	-	0
409	0.99	0	0.01	0	A	0.99
410	0.36	0	0.64	0	G	0.64
411	0.1	0	0.89	0	G	0.89
412	1	0	0	0	A	1
413	1	0	0	0	A	1
414	0.68	0	0.32	0	A	0.68
415	0	0	1	0	G	1
416	0	0	0	1	T	1
417	0.03	0.56	0.15	0.26	C	0.56
418	1	0	0	0	A	1
419	0	0	0	1	T	1
420	0	0.48	0	0.52	T	0.52
421	0	0.82	0	0.17	C	0.82
422	0	0	0	1	T	1
423	0.68	0.04	0.16	0.11	A	0.68
424	1	0	0	0	A	1
425	1	0	0	0	A	1
426	0.95	0	0.05	0	A	0.95
427	0	0	1	0	G	1
428	0	0	0	1	T	1
429	0.12	0.27	0.44	0.17	G	0.44
430	1	0	0	0	A	1
431	0	1	0	0	C	1
432	0	0.93	0	0.07	C	0.93
433	0.02	0	0.98	0	G	0.98
434	0	0	0	1	T	1
435	0.01	0.07	0.01	0.92	T	0.92
436	0	0	1	0	G	1
437	1	0	0	0	A	1
438	0.02	0	0.98	0	G	0.98
439	0	0	1	0	G	1
440	1	0	0	0	A	1
441	0.73	0.05	0.21	0.02	A	0.73
442	1	0	0	0	A	1
443	0	1	0	0	C	1
444	0.01	0.01	0.97	0	G	0.97
445	0	0	0	1	T	1
446	1	0	0	0	A	1
447	0	0	0	1	T	1
448	0	0	0	1	T	1
449	0	0	0	1	T	1
450	0	1	0	0	C	1
451	0	0.92	0	0.07	C	0.92
452	0	0	0	1	T	1
453	0.13	0.14	0.05	0.68	T	0.68
454	1	0	0	0	A	1
455	1	0	0	0	A	1
456	0	0.54	0	0.46	C	0.54
457	1	0	0	0	A	1
458	1	0	0	0	A	1
459	0.99	0	0.01	0	A	0.99
460	0	0	0	1	T	1
461	1	0	0	0	A	1
462	1	0	0	0	A	1


The most probable ancestral DNA sequence is:
ATGATTATTTTAAATACCTTAGACGAGTTTCAGCGCGTTTATCGGGAGGGGAAAAAATGGCAGCGCTGTATGGAGGCTATCAATAACCTTAAAAATATTAAGCCTAATGTTTTTTATTCGATTGGCGATTCGCTGGTTTATCGCCTTGCCGATGGTTCTGGACAGCAGGAGGAGTTATTTGAAGGCAACCGCCGTTATTTCGATGTGCATTATTACCTTGCCGGACAGGAAACGGTTGAGGTTGCGGATAAAAGCGCGTTGACTCCAGAGATGGCTTATCGCGATGAAAGTGACCGCGAGTTTTTCAGCGGGCAG---GGCGAGACGCATCAACTCAAGGCGGGCAACGTCGTCATTTTTGAAAACCACCAGGCACACCGGTTTTCGCAAGGTAAAGACGTG------AGGAAAGTCATTCTAAAAGTGACCGTTGAGGAAACGTATTTCCTTAACAAATAA

The most probable DNA sequence without gaps is:
ATGATTATTTTAAATACCTTAGACGAGTTTCAGCGCGTTTATCGGGAGGGGAAAAAATGGCAGCGCTGTATGGAGGCTATCAATAACCTTAAAAATATTAAGCCTAATGTTTTTTATTCGATTGGCGATTCGCTGGTTTATCGCCTTGCCGATGGTTCTGGACAGCAGGAGGAGTTATTTGAAGGCAACCGCCGTTATTTCGATGTGCATTATTACCTTGCCGGACAGGAAACGGTTGAGGTTGCGGATAAAAGCGCGTTGACTCCAGAGATGGCTTATCGCGATGAAAGTGACCGCGAGTTTTTCAGCGGGCAGGGCGAGACGCATCAACTCAAGGCGGGCAACGTCGTCATTTTTGAAAACCACCAGGCACACCGGTTTTCGCAAGGTAAAGACGTGAGGAAAGTCATTCTAAAAGTGACCGTTGAGGAAACGTATTTCCTTAACAAATAA

The accuracy score for that sequence is 0.898057395143488

The accuracy score is defined as the average probability of
the most probable bases.  It is NOT the probability that the
most probable sequence is correct.  That probability is 1.84727154090077e-26.
The natural log of that probability is -59.2535027101624.

Ancestral Protein Sequence:
Column headings:
MPAA = most probable amino acid, pMPAA = probability of MPAA
MPAA2 = second most probable amino acid, pMPAA2 = probability of MPAA2
Ratio = pMPAA/pMPAA2,  Unreliable means Ratio <1.5

MPAA	pMPAA	MPAA2	pMPAA2	Ratio
M	1	A	0	9999	
I	1	A	0	9999	
I	0.99	A	0	9999	
L	0.5236	F	0.4464	1.17293906810036	Unreliable
N	0.9604	D	0.0196	49	
T	1	A	0	9999	
L	1	A	0	9999	
D	0.8217	E	0.1683	4.88235294117647	
E	1	A	0	9999	
F	1	A	0	9999	
Q	0.99	K	0.01	99	
R	0.531	S	0.2528	2.1004746835443	
V	0.61	I	0.38	1.60526315789474	
Y	1	A	0	9999	
R	1	A	0	9999	
E	0.366324	A	0.356328	1.02805280528053	Unreliable
G	1	A	0	9999	
K	1	A	0	9999	
K	1	A	0	9999	
W	1	A	0	9999	
Q	0.99	A	0	9999	
R	1	A	0	9999	
C	1	A	0	9999	
M	0.7722	I	0.2178	3.54545454545455	
E	1	A	0	9999	
A	1	R	0	9999	
I	1	A	0	9999	
N	0.9801	D	0.0099	99	
N	1	A	0	9999	
L	0.9801	I	0.0099	99	
K	0.6912	N	0.2688	2.57142857142857	
N	0.89	S	0.11	8.09090909090909	
I	1	A	0	9999	
K	0.6909	E	0.2303	3	
P	1	A	0	9999	
N	0.99	D	0.01	99	
V	0.99	I	0.0099	100	
F	1	A	0	9999	
Y	1	A	0	9999	
S	1.01	A	0	9999	
I	0.92	M	0.07	13.1428571428571	
G	1	A	0	9999	
D	1	A	0	9999	
S	1.01	A	0	9999	
L	1	A	0	9999	
V	1.01	A	0	9999	
Y	1	A	0	9999	
R	1	A	0	9999	
L	0.9905	F	0.0095	104.263157894737	
A	0.960498	T	0.019602	49	
D	0.528165	E	0.432135	1.22222222222222	Unreliable
G	0.99	A	0	9999	
S	0.471765	T	0.211761	2.22781815348435	
A	0.3762	G	0.3762	1	Unreliable
Q	0.25026	E	0.22116	1.13157894736842	Unreliable
Q	0.29232	H	0.21168	1.38095238095238	Unreliable
E	0.454212	D	0.278388	1.63157894736842	
E	0.703	G	0.26	2.70384615384615	
L	0.99	A	0	9999	
F	0.98	L	0.01	98	
E	0.99	A	0	9999	
G	0.99	A	0	9999	
N	0.99	A	0	9999	
R	1	A	0	9999	
R	1	A	0	9999	
Y	1	A	0	9999	
F	1	A	0	9999	
D	1	A	0	9999	
V	1	A	0	9999	
H	1	A	0	9999	
Y	1	A	0	9999	
Y	1	A	0	9999	
L	0.9816	F	0.0084	116.857142857143	
A	0.92	G	0.04	23	
G	1	A	0	9999	
Q	0.873	H	0.1067	8.18181818181818	
E	1	A	0	9999	
T	0.98	M	0.0134	73.134328358209	
V	0.74	I	0.2522	2.93417922283902	
E	1	A	0	9999	
V	0.75	I	0.16	4.6875	
A	1	R	0	9999	
D	0.79101	N	0.130284	6.07142857142857	
K	1	A	0	9999	
S	0.511939	N	0.24354	2.10207358134187	
A	0.672	T	0.12	5.6	
L	0.99	A	0	9999	
T	0.7171	I	0.216	3.31990740740741	
P	0.8811	S	0.099	8.9	
E	0.9801	V	0.0099	99	
I	0.344916	V	0.329967	1.04530453045305	Unreliable
A	0.99	T	0.01	99	
Y	1	A	0	9999	
R	0.9009	H	0.0756	11.9166666666667	
D	1	A	0	9999	
E	1	A	0	9999	
S	0.99	A	0	9999	
D	1	A	0	9999	
R	1	A	0	9999	
E	1	A	0	9999	
F	0.99	A	0	9999	
F	0.99	A	0	9999	
S	0.9603	R	0.0295	32.5525423728814	
G	1	A	0	9999	
Q	0.86526	X	0.066885	12.9365328549002	
	0	-	0	0
G	1	A	0	9999	
E	0.94	V	0.03	31.3333333333333	
T	0.619332	A	0.103222	6	
H	0.92169	Q	0.04851	19	
Q	0.2093	X	0.19189	1.09072906352598	Unreliable
L	0.9634	F	0.0166	58.0361445783133	
K	0.615244	E	0.219128	2.80769230769231	
A	0.9801	T	0.0099	99	
G	0.99	A	0	9999	
N	0.99	A	0	9999	
V	1	A	0	9999	
V	0.9801	A	0.0099	99	
I	1	A	0	9999	
F	1	A	0	9999	
E	0.96	D	0.03	32	
N	1	A	0	9999	
H	0.94	Y	0.05	18.8	
Q	0.99	E	0.01	99	
A	0.99	R	0	9999	
H	0.9603	Y	0.0297	32.3333333333333	
R	1	A	0	9999	
F	1	A	0	9999	
S	0.31223	A	0.2072	1.50690154440154	
Q	0.5632	E	0.2816	2	
G	0.970004	S	0.01176	82.4833333333333	
K	0.5166	E	0.246	2.1	
D	0.480066	G	0.3738	1.28428571428571	Unreliable
V	1	A	0	9999	
	0	-	0	0
	0	-	0	0
R	0.627264	K	0.352836	1.77777777777778	
K	1	A	0	9999	
V	1	A	0	9999	
I	1	A	0	9999	
L	0.9546	F	0.0255	37.4352941176471	
K	1	A	0	9999	
V	1	A	0	9999	
T	1	A	0	9999	
V	0.9898	I	0.02	49.49	
E	1	A	0	9999	
E	0.94	D	0.07	13.4285714285714	
T	0.99	A	0	9999	
Y	1	A	0	9999	
F	1	A	0	9999	
L	0.9326	F	0.0574	16.2473867595819	
N	1	A	0	9999	
K	1	A	0	9999	
X	1	A	0	9999	


The most probable ancestral protein sequence is:
MIILNTLDEFQRVYREGKKWQRCMEAINNLKNIKPNVFYSIGDSLVYRLADGSAQQEELFEGNRRYFDVHYYLAGQETVEVADKSALTPEIAYRDESDREFFSGQ-GETHQLKAGNVVIFENHQAHRFSQGKDV--RKVILKVTVEETYFLNKX

The most probable ancestral protein sequence without gaps is:
MIILNTLDEFQRVYREGKKWQRCMEAINNLKNIKPNVFYSIGDSLVYRLADGSAQQEELFEGNRRYFDVHYYLAGQETVEVADKSALTPEIAYRDESDREFFSGQGETHQLKAGNVVIFENHQAHRFSQGKDVRKVILKVTVEETYFLNKX

The accuracy score for that sequence is 0.899466880794702

The accuracy score is defined as the average probability of
the most probable amino acids.  It is NOT the probability that the
most probable sequence is correct.  That probability is 5.55909498893776e-10
The natural log of that probability is -21.3104156067005.

